The Evolution of DNA Repair Genes, Proteins, and Processes

Acad addition amino acid Archaea aurantiacus Bacteriol Biochem Biol biology bootstrap values cells characterized clade cloned clustalw complete genome sequences conserved cyanobacteria database Deinococcus radiodurans DNA repair Eisen encode ERCC6 Escherichia coli eukaryotes Evol evolution evolutionary excision repair exonuclease filament functional predictions gene duplication gene family gene loss genetic genome glycosylase gram-positives green sulfur bacteria groups Hanawalt helicase homologous recombination IFCR lateral transfer LexA lineage Microbiol mismatch repair molecular systematic molecule motifs MutL MutS family MutS homologs MutS1 MutS2 Mycoplasma Natl neighbor-joining nucleotide orthologs patterns phenotype photolyase PHYLIP phylogenetic analysis phylogenetic methods phylogenetic trees phylogenomic Proc proteins Proteobacteria Pseudomonas pylori RecA RecA and SS-rRNA recA gene RecA protein RecA sequences RecA trees regions relationships repair genes repair processes replication residues rRNA similar SNF2 domain SNF2 family species SS-rRNA sequences SS-rRNA trees strand structure studies subfamilies tepidum volcanii Woese yeast